Engie referred to subject 7 as the super, and Snippy mentioned the GD tried to either find or make God, and had succeeded. What if Snippy IS the result of this experiment A man with the time-space-universe bending abilities of a god, but the mind and soul of an ordinary man. Snippy himself might not realize it. On that note, Zee Captein could be a very literal and physical creation of Snippy's mind, so could pilot and the rest. Snippy might literally be a god-like being, mad from loneliness, subconsciously creating company for himself.
Perhaps the 10,000 year old anomaly is Snippy himself. (put THAT in yer mug and drink it!)
thhhaaat Snippy was the son of an ewok, and that he grew up on mars, but then Doctor Manhattan showed up and accidentally wiped his memory and rearranged his anatomy, and then tried to kindly dump him in the nearest dimension, 73 years into the future??
The Biomatrix wants to show Charles Snippy the photographic evidence that Zee Captain is immortal. Or something to do with Zee Captain in fact being a god from Norse Mythology. NO! Wait... Mr. Kittyhawk's weakness. Wait... Most distant memory of the past... DINOSAURS. Yes.
The life-a-lope cat? He did vanish w/o a trace; maybe he went back in time. Hence the glow by the mtns that a few have mentioned. Maybe it (or something to do with the aliens) somehow influenced the growth and mutations of nature in the past and the biomass is giving him the chance to correct it or even use it as evidence at the hearing/trail w/ the aliens. Pointing out an outside influence that did not belong (someone violating prime directive, if there is one there like on Star Trek....)
ANNET exists there too, maybe? that would be terrifying... maybe ANNET is the future technological embodiment of some controlling goddess of the cave-people! (....that sounded way cooler in my head, but whatever.)
WAIT Zee Captain is Loki Engie is Heimdal (golden eyes) And um... I'm sure Snippy and Pilot are somehow sneakily Norse Gods. Maybe Cancer/Biomatrix is in fact the Fires of Muspell... Aww man, if there were three nuclear warheads that caused the apocalypse and they were called Fjalar, Gullinkambi and That Other One then it would be like the roosters crowing on Midgard Asgard and Hel for Ragnorok to begin and maybeandmaybe its like a whole modern Norse mythology and dang I've over thought it again. BUT IF THE SUN AND MOON ARE SWALLOWED BY WOLVES DON'T SAY I DID NOT WARN YOU, YOU SILLY SHOES! Ahem